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Test Code MGIP Gastrointestinal Pathogens Panel PCR

Additional Codes

Epic Ordering Code LAB3040628
NBS code LBC13067
Service code 23621

 

Specimen Requirements

Submit one of the following

Preferred:
Stool container

Specimen Type: Stool
Container/Tube: Sterile screw-capped container with attached spatula
Volume: 10.0g / 5.0mL
Minimum Volume: 5.0g / 2.0mL (liquid stool)
Collection Instructions: Random collection

Specimen Stability and Condition

Preferred temperatures for storage prior to and during shipping to NUH 

 

Specimen Type Stool
Ambient Submit to lab as soon as possible 
Refrigerate Non NUH sample - Stool in Cary-Blair OR stool to be sent on ice as soon as possible after collection
Frozen Do not freeze sample

Methodology

Real-time Multiplexed Polymerase Chain Reaction (RT-PCR)

Days and Times Performed

Monday through Saturday, TAT 2 - 3 days

Reference Interval

Not detected.

Testing Laboratory

National University Hospital
Clinical Microbiology, 67724343

Useful For

For the simultaneous qualitative detection and identification of nucleic acids from multiple viruses, bacteria, and parasites directly from stool samples obtained from individuals with signs and/or symptoms of gastrointestinal infection.

 

The following viruses, bacteria and parasites are identified:

1. Adenovirus F40/41

2. Astrovirus

3. Norovirus (GI/GII)

4. Rotavirus A

5. Sapovirus (GI, GII, GIV, GV)

6. Campylobacter (C.jejuni, C.coli and C.upsaliensis)

7. Enteraggregative Escherichia coli (EAEC)

8. Shigella/Enteroinvasive Escherichia coli (EIEC)

9. Enteropathogenic Escherichia coli (EPEC)

10. Enterotoxigenic Escherichia coli (ETEC) lt/st

11. Plesiomonas shigelloides

12. Salmonella spp.

13. Shiga-like toxin-producing Escherichia coli (STEC) stx1/stx2*

     (including specific identification of E. coli O157 serogroup within STEC)

14. Vibrio vulnificus

15. Vibrio parahaemolyticus

16. Vibrio cholerae

17. Yersinia enterocolitica

18. Cryptosporidium

19. Cyclospora cayetanensis

20. Entamoeba histolytica

21. Giardia lamblia

 

Please note that for patients with antibiotic-asscociated-diarrhoea, testing for Clostridioides difficile toxin should be ordered separately using [LAB253 Clostridioides difficile Toxin (23024)].

Update

Last updated 7/9/2026

LOINC Code Information

79381-0